PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000131G1240
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family ERF
Protein Properties Length: 245aa    MW: 25608.6 Da    PI: 4.9105
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000131G1240genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22.1e-184597155
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     + ++GVr++ + grWv+e+r+p ++g  +r +lg++ tae Aa+a++aa+++l+g
  PH01000131G1240 45 PVFRGVRRRGSAGRWVCELRVPGKRG--ARLWLGTYVTAEAAARAHDAAMLALRG 97
                     579******************95544..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.3E-144597IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-2646108IPR001471AP2/ERF domain
SuperFamilySSF541713.6E-1746108IPR016177DNA-binding domain
PROSITE profilePS5103221.93146106IPR001471AP2/ERF domain
SMARTSM003804.1E-2146112IPR001471AP2/ERF domain
CDDcd000181.77E-1147108No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MDMGNENSSS SSSASASSSP EHKTVWPSPP KRPAGRTKFR ETRHPVFRGV RRRGSAGRWV  60
CELRVPGKRG ARLWLGTYVT AEAAARAHDA AMLALRGRST VCLNFPDSAW LLAVPPALSD  120
LADVRRAAVE AVADFLLRKA ANGSAAAAAI DEATSSVSAP LLADNAGSSA TSGDPSSATL  180
DVPATLDSDM FEFDLFGEMD LDMYYASLAQ GLLMEPPPAA ATGAYWDNGD CGDGGPADVA  240
LWSY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0956030.0FP095603.1 Phyllostachys edulis cDNA clone: bphyem126d08, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004957402.12e-89PREDICTED: dehydration-responsive element-binding protein 1H-like
SwissprotQ64MA12e-78DRE1A_ORYSJ; Dehydration-responsive element-binding protein 1A
TrEMBLQ2VQ304e-95Q2VQ30_TRIMO; CRT/DRE binding factor 18
STRINGMLOC_4956.12e-91(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19636261
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.15e-30dehydration response element B1A